CDS:PFLU_0002-0

Annotations
Contact
Cross Reference
Location on Map
Properties
Publication
Relationship
Sequences
Summary
Annotations
Annotations: 
This record has the following annotations.
TermNameDefinition
GO:0009360DNA polymerase III complex
GO:00084083'-5' exonuclease activityCatalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end. [GOC:ai]
GO:0006260DNA replication
GO:0005737cytoplasmThe contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. [ISBN:0198547684]
GO:0003677DNA bindingAny molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). [GOC:dph, GOC:jl, GOC:tb, GOC:vw]
GO:0003887DNA-directed DNA polymerase activityCatalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group. [EC:2.7.7.7, GOC:vw, ISBN:0198547684]
Contact
Contact: 
NameDescriptionType
There are no contacts available.
Cross Reference
Cross Reference: 
EMBL
  • AM181176
EggNOG
GeneID
InterPro
KEGG
MPBAS00001
OrthoDB
PANTHER
PRIDE
Pfam
Pubmed
RefSeq
STRING
TIGRFAMs
Location on Map
Location on Map: 
MapPositionMap Description
This are no positions on any maps.
Properties
Similarity
  • SIMILARITY: Belongs to the beta sliding clamp family. {ECO:0000256|ARBA:ARBA00010752, ECO:0000256|PIRNR:PIRNR000804}.
  • fasta; with=UniProt:DP3B_ECOLI (EMBL:A91510);Escherichia coli O157:H7.; dnaN; DNA polymerase III, betachain (EC 2.7.7.7).; length=366; id 55.707%; ungapped id56.164%; E()=2.5e-74; 368 aa overlap; query 1-367; subject1-366
  • fasta; with=UniProt:DP3B_PSEPK (EMBL:AE016774); Pseudomonas putida.; dnaN; DNA polymerase III, beta chain (EC 2.7.7.7).; length=367; id 92.916%; ungapped id 92.916%; E()=3.1e-127; 367 aa overlap; query 1-367; subject 1-367
Codon Start
1
Uniprot Annotation Score
2 out of 5
Ft Domain
DOMAIN 1..119; note:DNA_pol3_beta; evidence:ECO:0000259|Pfam:PF00712; DOMAIN 130..244; note:DNA_pol3_beta_2; evidence:ECO:0000259|Pfam:PF02767; DOMAIN 247..366; note:DNA_pol3_beta_3; evidence:ECO:0000259|Pfam:PF02768
Gene
dnaN
Product
  • Beta sliding clamp
  • DNA polymerase III, beta chain
Uniprot Review Status
unreviewed
Protein Id
CAY46287.1
Frame
0
Inference
Inferred from homology
Confidence Level
2
Seqid
MPBAS00001
Locus Tag
PFLU_0002
Features
Domain (3)
Protein Families
Beta sliding clamp family
Publication
Publication: 
There are no publications associated with this record.
Relationship
Relationship: 
There are 0 relationships.
Relationships
There are no relationships
Sequences
Sequence
No sequence is available.
Sequence Length
Sequence Checksum
d41d8cd98f00b204e9800998ecf8427e
Sequence Coordinates
MPBAS00001:1545..2648+
Summary
Resource Type
CDS
Accession
Organism
Pseudomonas fluorescens
Name
CDS:PFLU_0002-0
Identifier
CDS:PFLU_0002-0
Is Analysis
No
Is Obsolete
No
Time Accessioned
Thursday, February 24, 2022 - 23:06
Time Last Modified
Thursday, February 24, 2022 - 23:06