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CDS:PFLU_0018-0
Annotations
Contact
Cross Reference
Location on Map
Properties
Publication
Relationship
Sequences
Summary
Annotations
Annotations:
This record has the following annotations.
Term
Name
Definition
GO:0046872
metal ion binding
Binding to a metal ion. [GOC:ai]
GO:0006412
translation
GO:0042586
peptide deformylase activity
Catalysis of the reaction: formyl-L-methionyl peptide + H2O = formate + methionyl peptide. [EC:3.5.1.88, GOC:jl]
Contact
Contact:
Name
Description
Type
There are no contacts available.
Cross Reference
Cross Reference:
EMBL
AM181176
EggNOG
COG0242
GeneID
58729814
61615272
HAMAP
MF_00163
InterPro
IPR023635
IPR036821
KEGG
pfs
MPBAS00001
20984..21490
OrthoDB
1649129at2
PANTHER
PTHR10458
PRIDE
C3KE48
PRINTS
PR01576
Pfam
PF01327
Pubmed
19432983
RefSeq
WP_005783383.1
STRING
216595.PFLU_0018
SUPFAM
SSF56420
TIGRFAMs
TIGR00079
Location on Map
Location on Map:
Map
Position
Map Description
This are no positions on any maps.
Properties
Similarity
SIMILARITY: Belongs to the polypeptide deformylase family. {ECO:0000256|ARBA:ARBA00010759, ECO:0000256|HAMAP-Rule:MF_00163}.
fasta; with=UniProt:DEF_ECOLI (EMBL:H91147); Escherichia coli O157:H7.; def; Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide deformylase).; length=168; id 58.683%; ungapped id 59.036%; E()=6.8e-34; 167 aa overlap; query 2-168; subject 1-166
fasta; with=UniProt:DEF_PSEAE (EMBL:H83643); Pseudomonas aeruginosa.; def; Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide deformylase).; length=168; id 86.905%; ungapped id 86.905%; E()=6.8e-56; 168 aa overlap; query 1-168; subject 1-168
Codon Start
1
Uniprot Annotation Score
2 out of 5
Gene
def
Product
Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
peptide deformylase
Uniprot Review Status
unreviewed
Protein Id
CAY46303.1
Frame
0
Inference
Inferred from homology
Confidence Level
2
Seqid
MPBAS00001
Locus Tag
PFLU_0018
Features
Active site (1); Metal binding (3)
Protein Families
Polypeptide deformylase family
Publication
Publication:
There are no publications associated with this record.
Relationship
Relationship:
There are 0 relationships.
Relationships
There are no relationships
Sequences
Sequence
No sequence is available.
Sequence Length
Sequence Checksum
d41d8cd98f00b204e9800998ecf8427e
Sequence Coordinates
MPBAS00001:20984..21490-
Summary
Resource Type
CDS
Accession
Organism
Pseudomonas fluorescens
Name
CDS:PFLU_0018-0
Identifier
CDS:PFLU_0018-0
Is Analysis
No
Is Obsolete
No
Time Accessioned
Thursday, February 24, 2022 - 23:06
Time Last Modified
Thursday, February 24, 2022 - 23:06