CDS:PFLU_0023-0

Annotations
Contact
Cross Reference
Location on Map
Properties
Publication
Relationship
Sequences
Summary
Annotations
Annotations: 
This record has the following annotations.
TermNameDefinition
GO:0046872metal ion bindingBinding to a metal ion. [GOC:ai]
GO:0042803protein homodimerization activityBinding to an identical protein to form a homodimer. [GOC:jl]
GO:0006782protoporphyrinogen IX biosynthetic processThe chemical reactions and pathways resulting in the formation of protoporphyrinogen IX. [GOC:go_curators]
GO:0005737cytoplasmThe contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. [ISBN:0198547684]
GO:0004109coproporphyrinogen oxidase activityCatalysis of the reaction: coproporphyrinogen III + 2 H(+) + O(2) = 2 CO(2) + 2 H(2)O + protoporphyrinogen IX. [EC:1.3.3.3, RHEA:18257]
Contact
Contact: 
NameDescriptionType
There are no contacts available.
Cross Reference
Cross Reference: 
EMBL
  • AM181176
EggNOG
GeneID
HAMAP
InterPro
KEGG
MPBAS00001
OrthoDB
PANTHER
PRIDE
PRINTS
  • PR00073
Pfam
Pubmed
RefSeq
STRING
SUPFAM
UniPathway
  • UPA00251;UER00322
Location on Map
Location on Map: 
MapPositionMap Description
This are no positions on any maps.
Properties
Pathway
PATHWAY: Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1. {ECO:0000255|HAMAP-Rule:MF_00333}.
Similarity
  • SIMILARITY: Belongs to the aerobic coproporphyrinogen-III oxidase family. {ECO:0000255|HAMAP-Rule:MF_00333}.
  • fasta; with=UniProt:HEM6_ECOLI (EMBL:B36964);Escherichia coli.; hemF; Coproporphyrinogen III oxidase,aerobic (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogenoxidase).; length=299; id 68.771%; ungapped id 69.231%;E()=1.8e-91; 301 aa overlap; query 1-301; subject 1-299
  • fasta; with=UniProt:HEM6_PSEPK (EMBL:AE016774); Pseudomonas putida (strain KT2440).; hemF; Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase).; length=303; id 90.066%; ungapped id 90.066%; E()=3e-120; 302 aa overlap; query 1-302; subject 1-302
Codon Start
1
Uniprot Annotation Score
3 out of 5
Gene
hemF
Product
  • Oxygen-dependent coproporphyrinogen-III oxidase (CPO) (Coprogen oxidase) (Coproporphyrinogenase) (EC 1.3.3.3)
  • coproporphyrinogen III oxidase, aerobic
Annotated Protein Regions
REGION 109..111; note:Substrate binding; evidence:ECO:0000255|HAMAP-Rule:MF_00333; REGION 241..276; note:Important for dimerization; evidence:ECO:0000255|HAMAP-Rule:MF_00333; REGION 259..261; note:Substrate binding; evidence:ECO:0000255|HAMAP-Rule:MF_00333
Uniprot Review Status
reviewed
Protein Id
CAY46308.1
Frame
0
Inference
Inferred from homology
Confidence Level
2
Seqid
MPBAS00001
Locus Tag
PFLU_0023
Features
Active site (1); Binding site (1); Chain (1); Metal binding (4); Region (3); Site (1)
Protein Families
Aerobic coproporphyrinogen-III oxidase family
Publication
Publication: 
There are no publications associated with this record.
Relationship
Relationship: 
There are 0 relationships.
Relationships
There are no relationships
Sequences
Sequence
No sequence is available.
Sequence Length
Sequence Checksum
d41d8cd98f00b204e9800998ecf8427e
Sequence Coordinates
MPBAS00001:25472..26404+
Summary
Resource Type
CDS
Accession
Organism
Pseudomonas fluorescens
Name
CDS:PFLU_0023-0
Identifier
CDS:PFLU_0023-0
Is Analysis
No
Is Obsolete
No
Time Accessioned
Thursday, February 24, 2022 - 23:06
Time Last Modified
Thursday, February 24, 2022 - 23:06